W 1710 został pozbawiony profesury i wydalony z Uniwersytetu ze względu na nauczanie herezji.
Dzieła Wybrane prace Williama Whistona: A New Theory of the Earth, From its Original, to the Consummation of All Things, Where the Creation of the World in Six Days, the Universal Deluge, And the General Conflagration, As laid down in the Holy Scriptures, Are Shewn to be perfectly agreeable to Reason and Philosophy., London 1696 A Short View of the Chronology of the Old Testament, and of the Harmony of the Four Evangelists, Cambridge, 1702 An Essay on the Revelation of Saint John, So Far as Concerns the Past and Present Times, 1706 Arithmetica Universalis, 1707 (redakcja tekstu Isaaca Newtona) Praelectiones Astronomicae Cantabrigiae in Scholis Habitae, London, 1707 Sermons and Essays upon Several Subjects, London, 1709 Praelectiones Physico-mathematicae Cantabrigiae, in Scholis Publicis Habitae, 1710 Primitive Christianity Revived, 1711–1712 A New method of Discovering the Longitude at Sea and Land, Humbly Proposed to the Consideration of the Publick, London 1714 (współautor: H.