Przykłady modeli gruboziarnistych białek: model Levitta i Warshela 1975 SICHO (SIde CHain Only) 1998Kolinski, A.; Jaroszewski, L.; Rotkiewicz, P.; Skolnick, J. An efficient Monte Carlo model of protein chains. Modeling the short- range correlations between side group centers of mass. J. Phys. Chem. B 1998, 102, 4628−4637. Rosetta centroid mode 2004Rohl, C.; Strauss, C.; Misura, K.; Baker, D. In Numerical Computer Methods, Part D; Elsevier: Amsterdam, 2004; Vol. 383. CABS (C-Alpha, Beta and Side chain) 2004Kolinski, A. Protein modeling and structure prediction with a reduced representation. Acta Biochim. Polym. 2004, 51, 349−371. UNRES (UNited RESidues) 2014Liwo, A.; Baranowski, M.; Czaplewski, C.; Golas, E.; He, Y.; Jagiela, D.; Krupa, P.; Maciejczyk, M.; Makowski, M.; Mozolewska, M. A.; et al. A unified coarse-grained model of biological macromolecules based on mean-field multipole-multipole interactions. J. Mol. Model. 2014, 20, 2306.
SURPASS (Single United Residue per Pre-Averaged Secondary Structure fragment) 2017Dawid, A.E.; Gront, D.;